Information for 17-TAGCCAATGGCAG (Motif 25)

A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G A G T C A G T C C G T A A C G T A C G T A C T G A C T G A G T C A C G T T C G A
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 25.7bp
Average Position of motif in Background35.7 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAGCCAATGGCAG
-AGCCAATCGG--
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAGCCAATGGCAG
ACTAGCCAATCA---
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGCCAATGGCAG
-TGCCAA------
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAGCCAATGGCAG---
CAATCACTGGCAGAAT
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGCCAATGGCAG
CGTGCCAAG-----
 A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGCCAATGGCAG
-RAACAATGGN--
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TAGCCAATGGCAG--
----TAATGGCGGNC
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGCCAATGGCAG
CTCACACAATGGCGC
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGCCAATGGCAG--
NNTNNACAATGGGANNN
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGCCAATGGCAG
VRAACAATGG---
 A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C T G A C T G A G T C C G T A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T