Information for 4-HATTAAAAWCAAKRCT (Motif 4)

G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C G T A C C G A T A C G T A T C G C G A T A C G T C A G T A G C T A C G T C T G A C G T A A C G T C G A T
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.758
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 26.3bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---HATTAAAAWCAAKRCT
CCGTATTATAAACAA----
 A C G T A C G T A C G T G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--HATTAAAAWCAAKRCT
NTAATTAATAT-------
 A C G T A C G T G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:HATTAAAAWCAAKRCT
-ATTAAA---------
 G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:HATTAAAAWCAAKRCT
AACAAACAACAAGAG-
 G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----HATTAAAAWCAAKRCT
TAATTAATTAATAACTA----
 A C G T A C G T A C G T A C G T A C G T G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:HATTAAAAWCAAKRCT-
-NNTNANAACAATTNNA
 G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T A C G T
A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---HATTAAAAWCAAKRCT
ACTAATTAAA---------
 A C G T A C G T A C G T G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:HATTAAAAWCAAKRCT
-NTTNAGAACAATTA-
 G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--HATTAAAAWCAAKRCT
CTAATTAA----------
 A C G T A C G T G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:HATTAAAAWCAAKRCT-
---GCAAAACATTACTA
 G C A T G T C A A C G T A G C T C G T A C T G A G C T A C G T A C G T A A T G C C G T A C G T A C A G T C T A G A G T C C G A T A C G T
A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A