Information for 11-AAGTTTAGAG (Motif 33)

C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T C G T A C G T A C G T A A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.569e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.5 +/- 35.7bp
Average Position of motif in Background61.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGTTTAGAG
TATTGTTTATT-
 A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGTTTAGAG
AAGCTTG---
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGTTTAGAG----
--GGTTAGAGACCT
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGTTTAGAG-
AAAGATCAAAGG
 A C G T C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGTTTAGAG--
--BTBRAGTGSN
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGTTTAGAG-
-TGTCTAGACG
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGTTTAGAG---
AAAGATCAAAGGAA
 A C G T C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGTTTAGAG--
NTGTTTAYATWW
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAGTTTAGAG
AAGAGGATTAG--
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGTTTAGAG
TTGTTTAC--
 C G T A C G T A A C T G A C G T A C G T A C G T C G T A A C T G C G T A A C T G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T