Information for 21-GTGCACAATGCCATTS (Motif 31)

A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
Reverse Opposite:
T A G C C T G A T C G A C G A T C T A G A C T G A T G C C G T A A G C T C G A T A C T G A C G T T A C G A G T C G T C A A T G C
p-value:1e-7
log p-value:-1.789e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 28.5bp
Average Position of motif in Background47.2 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS--
---AACAATGNTATTGTT
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G A C G T A C G T
A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS
-VRRACAAWGG-----
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS--
---AACACTACCATTGTT
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G A C G T A C G T
A C G T A C G T A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACAATGCCATTS
NTNTATGTGCACATNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS
----ACAAAG------
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS
---GACAATGNN----
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGCACAATGCCATTS
-GGAACAAAGR-----
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTGCACAATGCCATTS
AATGAACAATGGAATT-
 A C G T A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGCACAATGCCATTS
--RAACAATGGN----
 A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGCACAATGCCATTS
NNGTATGTGCACATNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G A G T C G T C A A G T C C G T A C T G A C G A T A T C G T G A C A G T C C G T A A G C T A G C T A T C G
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T A C G T A C G T