Information for 10-GGTAGATCACTTT (Motif 25)

A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A C T G A C G T A C T G G T C A A C G T A G T C A C G T C G T A A T G C A G T C
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.5 +/- 10.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTAGATCACTTT-
ACCGGTTGATCACCTGA
 A C G T A C G T A C G T A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGTAGATCACTTT-
----AAGCACTTAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGTAGATCACTTT-
-----ACCACTTAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGTAGATCACTTT-
-----ACCACTTAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTAGATCACTTT--
-----ACCACTTGAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGTAGATCACTTT
--AAGGTCAC---
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGTAGATCACTTT-
----MRSCACTYAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGTAGATCACTTT-
------GCACTTAA
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGTAGATCACTTT
-HNRAATCAAT--
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGTAGATCACTTT-
-----TTGACTTTT
 A C T G A T C G A C G T C G T A C T A G C G T A A C G T A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T