Information for 4-GATACTGCCCATARAT (Motif 4)

C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
Reverse Opposite:
G C T A A C G T G A T C C A G T C T G A G A C T A T C G C A T G A C T G A G T C C G T A C A T G A G C T G C T A C A G T A G T C
p-value:1e-12
log p-value:-2.972e+01
Information Content per bp:1.600
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif221.9
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets42.9 +/- 23.2bp
Average Position of motif in Background49.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GATACTGCCCATARAT
----CTGCCCGCA---
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GATACTGCCCATARAT-----
-----TGACCATATATGGTCA
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GATACTGCCCATARAT--
--CGAAGCACACAAAATA
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATACTGCCCATARAT
GGGTGTGCCCAAAAGG
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GATACTGCCCATARAT
----ATGCCCACC---
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATACTGCCCATARAT
TACATGTGCACATAAAA
 A C G T C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GATACTGCCCATARAT--
------GGCCATAAATCA
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GATACTGCCCATARAT
-----TGCCCAGNHW-
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GATACTGCCCATARAT--
------GGCCATAAATCA
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GATACTGCCCATARAT---
---AAAGCTCGTAAAATTT
 C T A G G T C A C G A T T C G A G T A C C G A T A C T G T G A C G A T C A T G C C T G A G A C T G T C A C T A G T G C A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T