Information for 11-GGCATGTATCTGC (Motif 29)

A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G C T G A A C G T G T C A A G T C C G T A C G A T A C T G A G T C A G T C
p-value:1e-4
log p-value:-9.534e+00
Information Content per bp:1.935
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 22.3bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCATGTATCTGC
--AATGTATCAAT
 A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCATGTATCTGC
AAGGCAAGTGT----
 A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGTATCTGC
TGGAATGT------
 A C G T A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCATGTATCTGC
---ATGMATATDC
 A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCATGTATCTGC
NTGGAATGTG-----
 A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGCATGTATCTGC--
AGGATGACTCAGCAC
 A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C A C G T A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGTATCTGC
TGGCACGTGCCG--
 A C G T A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCATGTATCTGC
CCWGGAATGY------
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCATGTATCTGC----
--YATGCATATRCATRT
 A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCATGTATCTGC
-GCACGTAY----
 A C T G A C T G A G T C C G T A A C G T A C T G A C G T C G T A A G C T A G T C C G A T A C T G A G T C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T