Information for 6-GCGGCCGAGG (Motif 24)

A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A T G C A T C G A C T G A T G C A G T C C A T G A G T C
p-value:1e-7
log p-value:-1.834e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif155.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets65.4 +/- 28.4bp
Average Position of motif in Background53.2 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCGGCCGAGG
GAGSCCGAGC
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGGCCGAGG----
CAGGCCNNGGCCNN
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGGCCGAGG
-AGGCCTAG-
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCCGAGG---
GGCGGGGGCGGGGG
 A C G T A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCCGAGG
NCGCGGACGTTG
 A C G T A C G T A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGCCGAGG--
-AGCCTCAGGCA
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGCCGAGG----
ATTGCCTGAGGCAAT
 A C G T A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGCCGAGG--
-AGCCTCAGGCA
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGCCGAGG--
-CGCCTCAGGCA
 A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCCGAGG----
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C T G G T A C C T A G A T C G A G T C T A G C A T C G T C G A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A