Information for 8-AGATAGCARACAGCCT (Motif 11)

C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C C G A T C T A G A G C T G A C T C A G T A C T G A G T C A G C T C T G A A C G T A G T C A C G T
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.719
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.8 +/- 23.5bp
Average Position of motif in Background43.8 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGATAGCARACAGCCT-
-CGAAGCACACAAAATA
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
--WAAGTAAAYA----
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
-----CCAGACRSVB-
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
----TGTAAACAGGA-
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
-----CCAGACAG---
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
-----GTAAACAG---
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGATAGCARACAGCCT
AGGTGNCAGACAG---
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGATAGCARACAGCCT
TGACANARRCCAGRC-
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGATAGCARACAGCCT
--AAAGTAAACA----
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGATAGCARACAGCCT
--CTGGCAGNCTGCCA
 C G T A T C A G G T C A A G C T C T G A C T A G G T A C G C T A C T G A C T G A A G T C C G T A C T A G T A G C G T A C A C G T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A