Information for 6-CACGTGATCT (Motif 6)

A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
Reverse Opposite:
T G C A C A T G C T G A A C G T A G T C C G T A G T A C T A C G C G A T A C T G
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.780
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif141.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets46.1 +/- 25.3bp
Average Position of motif in Background49.1 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mitf/MA0620.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGATCT
NCACGTGACN-
 A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGATCT
NCACGTGACN-
 A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATCT
GCCACGTGACC-
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:4
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATCT
ATCACGTGAT--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATCT
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:6
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATCT
ATCACGTGAT--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATCT
ACCACGTGAC--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGATCT
TCACGTGACC-
 A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

TFEC/MA0871.1/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATCT
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATCT
ATCACGTGAC--
 A C G T A C G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A G C T G T A C A C G T
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T