Information for 7-GAAGTWCATTGTCKKC (Motif 14)

A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C T G A C A C T G C G T A A G T C C G T A G T C A A C G T A C T G C G A T C T G A A G T C A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.896
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 19.1bp
Average Position of motif in Background79.2 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC
----CTCATTGTC---
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC
-----CCATTGTTTT-
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC
------CTTTGT----
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC
-----CCWTTGTYYB-
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAGTWCATTGTCKKC-
-ANNTCCATTGTTCNNN
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC
-----CCATTGTTYB-
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAGTWCATTGTCKKC--
--ANTCCTTTGTCTNNNN
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAAGTWCATTGTCKKC
----NCCATTGTTY--
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAAGTWCATTGTCKKC-
--NNNCCATTGTGTNAN
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAGTWCATTGTCKKC----
-----CCATTGTATGCAAAT
 A C T G C G T A C G T A A C T G A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T