Information for 2-CACTTTTACT (Motif 6)

A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
Reverse Opposite:
C G T A C T A G G A C T C G T A C T G A G T C A C G T A A C T G C G A T A C T G
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.871
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.1 +/- 25.0bp
Average Position of motif in Background46.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACTTTTACT----
TCACTTTCACTTTCN
 A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CACTTTTACT---
-ACTTTCACTTTC
 A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACTTTTACT
ACCACTTGAA--
 A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CACTTTTACT
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACTTTTACT
CCACTTGAA--
 A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACTTTTACT
ACCACTTAA---
 A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACTTTTACT---
---TTTTATTRGN
 A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CACTTTTACT-
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTTTTACT
ACCACTTAA---
 A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.59
Offset:-9
Orientation:forward strand
Alignment:---------CACTTTTACT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A G C T A C G T C T G A A G T C A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T