Information for 9-AGGATCACCG (Motif 15)

C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
Reverse Opposite:
G T A C A T C G A C T G C G A T C T A G G T C A A C G T A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.861
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif66.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets45.3 +/- 30.5bp
Average Position of motif in Background46.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGGATCACCG
NGGATTAN--
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGATCACCG----
CATAAGACCACCATTAC
 A C G T A C G T A C G T C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGATCACCG
GGGAGGACNG
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGATCACCG
NGGGATTA---
 A C G T C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGATCACCG
-GGATTAGC-
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGATCACCG----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGATCACCG
VRGGATTARN-
 A C G T C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGATCACCG
AAGGTCAC--
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGATCACCG
NGGATTAA--
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGATCACCG
GGGATTAA--
 C G T A A C T G A C T G T G C A A C G T A G T C C G T A A G T C T A G C A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T