Motif 12

Information for 6-GCCGCCCCGCCCT (Motif 12)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.430e+01
Information Content per bp:	1.752
Number of Target Sequences with motif	23.0
Percentage of Target Sequences with motif	2.68%
Number of Background Sequences with motif	216.9
Percentage of Background Sequences with motif	0.46%
Average Position of motif in Targets	42.3 +/- 26.0bp
Average Position of motif in Background	49.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:	1
Score:	0.78
Offset:	3
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT ---GCCCCGCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:	2
Score:	0.76
Offset:	2
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT- --GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:	3
Score:	0.75
Offset:	1
Orientation:	reverse strand
Alignment:	GCCGCCCCGCCCT-- -NAGCCCCGCCCCCN

Klf4/MA0039.2/Jaspar

Match Rank:	4
Score:	0.75
Offset:	3
Orientation:	reverse strand
Alignment:	GCCGCCCCGCCCT ---GCCCCACCCA

SP1/MA0079.3/Jaspar

Match Rank:	5
Score:	0.75
Offset:	3
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT- ---GCCCCGCCCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:	6
Score:	0.74
Offset:	3
Orientation:	reverse strand
Alignment:	GCCGCCCCGCCCT ---GCCMCRCCCH

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:	7
Score:	0.74
Offset:	1
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT--- -NRGCCCCRCCCHBNN

SP2/MA0516.1/Jaspar

Match Rank:	8
Score:	0.73
Offset:	3
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT----- ---GCCCCGCCCCCTCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:	9
Score:	0.72
Offset:	0
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT--- TCGACCCCGCCCCTAT

PB0107.1_Ascl2_2/Jaspar

Match Rank:	10
Score:	0.72
Offset:	0
Orientation:	forward strand
Alignment:	GCCGCCCCGCCCT--- CTATCCCCGCCCTATT