Information for 1-CCMGGGCAVRGTGCCY (Motif 7)

T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
Reverse Opposite:
C T G A C A T G A T C G T A G C G T C A A T G C A G C T A G C T A C G T A T C G T G A C A G T C G A T C C A G T C A T G A T C G
p-value:1e-13
log p-value:-3.107e+01
Information Content per bp:1.502
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif29.12%
Number of Background Sequences with motif8826.4
Percentage of Background Sequences with motif18.63%
Average Position of motif in Targets50.1 +/- 23.7bp
Average Position of motif in Background49.8 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCMGGGCAVRGTGCCY-
-CTTGGCANNNTGCCAA
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCMGGGCAVRGTGCCY
--CTGGCAGNCTGCCA
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCMGGGCAVRGTGCCY-
---TGGCACCATGCCAA
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCMGGGCAVRGTGCCY
-NAGGTCACNNTGACC
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCMGGGCAVRGTGCCY-
--AGGTCACCCTGACCT
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCMGGGCAVRGTGCCY
WDNCTGGGCA--------
 A C G T A C G T T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCMGGGCAVRGTGCCY
ACATGCCCGGGCAT-------
 A C G T A C G T A C G T A C G T A C G T T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCMGGGCAVRGTGCCY--
-CAGGTCACCGTGACCTT
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T A C G T A C G T
A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCMGGGCAVRGTGCCY
TNNGGGCAG-------
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCMGGGCAVRGTGCCY-----
-YCAGGCWCAGTACCAGGCTC
 T A G C G T A C G T C A C T A G T C A G A C T G T A G C T G C A T C G A T C G A T A C G C A G T A T C G T A G C G T A C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C