Information for 19-CATGACACCCAAA (Motif 30)

A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
Reverse Opposite:
A C G T A C G T A C G T A T C G C A T G A C T G C G A T C T A G A G C T A T G C G T C A A C G T T A C G
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.656
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif477.7
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets59.6 +/- 21.2bp
Average Position of motif in Background50.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CATGACACCCAAA-
ATAAATGACACCTATCA
 A C G T A C G T A C G T A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATGACACCCAAA
--TGACACCT---
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATGACACCCAAA
--TBGCACGCAA-
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGACACCCAAA---
CGAAGCACACAAAATA
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGACACCCAAA-
ACTATGCCAACCTACC
 A C G T A C G T A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATGACACCCAAA
-TTGACAG-----
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATGACACCCAAA
ARNTGACA------
 A C G T A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGACACCCAAA
SCTGTCAVTCAV-
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATGACACCCAAA
--TCACACCT---
 A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATGACACCCAAA
VGCTGWCAVB----
 A C G T A T G C T G C A A C G T A T C G T C G A A G T C C G T A T G A C G T A C T A G C G T C A G T C A T C G A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T