Information for 9-CTCCAGAGCA (Motif 18)

A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
Reverse Opposite:
G A C T T A C G A T G C A C G T T A G C A C G T A T C G T C A G T C G A T A C G
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.526
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif377.1
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets50.9 +/- 24.7bp
Average Position of motif in Background49.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCCAGAGCA
BTBRAGTGSN
 A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGAGCA
ACWTCAAAGG-
 A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CTCCAGAGCA
TGAATTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGAGCA
ACATCAAAGG-
 A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCCAGAGCA
RSCACTYRAG----
 A C G T A C G T A C G T A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCCAGAGCA
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCCAGAGCA
---CACAGN-
 A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTCCAGAGCA
-----CAGCC
 A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCCAGAGCA-----
CCACACAGCAGGAGA
 A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGAGCA
GCTTCC-----
 A C G T A T G C A G C T A G T C T A G C T G C A A C T G T G C A T A C G A T G C C T G A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T