Information for 6-CTSCCAGGCCWGV (Motif 14)

T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
Reverse Opposite:
A G T C A T G C G C A T A C T G T A C G A T G C G A T C G A C T C A T G T C A G T A G C G C T A A C T G
p-value:1e-11
log p-value:-2.667e+01
Information Content per bp:1.592
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif25.26%
Number of Background Sequences with motif7628.2
Percentage of Background Sequences with motif16.10%
Average Position of motif in Targets51.5 +/- 24.2bp
Average Position of motif in Background50.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTSCCAGGCCWGV---
-TCCCAGMCRAGCCCC
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTSCCAGGCCWGV
---CTAGGCCT--
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTSCCAGGCCWGV
---CNAGGCCT--
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTSCCAGGCCWGV-
SCAGYCADGCATGAC
 A C G T T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTSCCAGGCCWGV
ATGCCAGACN---
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTSCCAGGCCWGV
GGGGCCGAGGCCTG-
 A C G T A C G T T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTSCCAGGCCWGV
-TGCCAA------
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTSCCAGGCCWGV
TTGCCAAG-----
 T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTSCCAGGCCWGV
CGTGCCAAG-----
 A C G T T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTSCCAGGCCWGV--
GCAGCCAAGCGTGACN
 A C G T T G A C C G A T A T C G A G T C G T A C C T G A C T A G T A C G A T G C T G A C C G T A T A C G T C A G A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C