Information for 20-CGTCACACTTGAK (Motif 31)

G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
Reverse Opposite:
T G A C A C G T A T G C G T C A G C T A A T C G A C G T A C T G C G A T A C T G C G T A A T G C A C T G
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.720
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 19.5bp
Average Position of motif in Background79.9 +/- 1.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGTCACACTTGAK
----CCACTTGAA
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTCACACTTGAK----
CGTCACGCATGACTGCA
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTCACACTTGAK----
CGTCACGCATGACTGCA
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGTCACACTTGAK
---ACCACTTGAA
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTCACACTTGAK
KTTCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTCACACTTGAK
--TCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTCACACTTGAK
--TCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTCACACTTGAK
--TCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTCACACTTGAK
--TCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTCACACTTGAK
--TCACACCT---
 G T A C A T C G C G A T T G A C G C T A A G T C C G T A A T G C C G A T C A G T A T C G C G T A A C T G
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T