Information for 18-GTTACAAGGGAGG (Motif 29)

T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
Reverse Opposite:
A G T C G T A C A C G T A G T C G T A C A G T C G C A T A C G T T A C G A G C T C T G A G T C A A T G C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.661
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif165.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets53.0 +/- 25.9bp
Average Position of motif in Background49.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTACAAGGGAGG
CTGTTGCTAGGS---
 A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GTTACAAGGGAGG---
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTACAAGGGAGG
NTTGATACATT-----
 A C G T A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTACAAGGGAGG
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTACAAGGGAGG-
GTTGCCATGGNAAC
 T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTACAAGGGAGG
NCCGTTGCTANGNGN-
 A C G T A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTTACAAGGGAGG
NGTCCCNNGGGA--
 A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GTTACAAGGGAGG
TGATTGTTAACAGTTGG-
 A C G T A C G T A C G T A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GTTACAAGGGAGG----
-------GGGAGGACNG
 T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

NFIL3/MA0025.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTTACAAGGGAGG
ANGTTACATAA----
 A C G T A C G T T A C G A C G T A G C T C T G A A G T C C G T A C G T A T C A G C A T G T C A G G T C A A C T G C T A G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T