Information for 13-GACAGCTTATGTG (Motif 18)

A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C G T G C T A C G T A A C T G G T A C A G C T A C T G G A C T T A G C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.816
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 25.4bp
Average Position of motif in Background75.8 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACAGCTTATGTG
-NCAGCTGCTG--
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACAGCTTATGTG
AGCAGCTGCTNN-
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAGCTTATGTG
GACAGCTGCAG--
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAGCTTATGTG
AACAGCTGCAG--
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GACAGCTTATGTG
-ACAGCTGTTV--
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAGCTTATGTG
AACAGCTGAT---
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GACAGCTTATGTG
-HCAGCTGDTN--
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAGCTTATGTG
AGCAGCTGCT---
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACAGCTTATGTG
AACAGCTG-----
 A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCTTATGTG
GTATTGACAGCTNNTT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C T G A A C T G A G T C A C G T C A G T T G C A A C G T C T A G A C G T A C T G
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T A C G T A C G T