Information for 12-TGCCGGGTCAGTT (Motif 17)

C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T C A T G C G T A A G T C A G T C A G T C C T A G A C T G A G T C G C T A
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 13.6bp
Average Position of motif in Background55.7 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGCCGGGTCAGTT-
CGCGCCGGGTCACGTA
 A C G T A C G T C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCCGGGTCAGTT-
AGAGCGGGGTCAAGTA
 A C G T A C G T C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TGCCGGGTCAGTT
----AGGTCA---
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCCGGGTCAGTT-
---CAGGTAAGTAT
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCCGGGTCAGTT--
CTCCAGGGGTCAATTGA
 A C G T A C G T C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGCCGGGTCAGTT--
-----TGGCAGTTGN
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCCGGGTCAGTT-----
--NNNTGGCAGTTGGTNN
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCCGGGTCAGTT
--AGRGGTCA---
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCCGGGTCAGTT
HTGCTGAGTCAT--
 A C G T C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCCGGGTCAGTT---
-GGNGCGNCTGTTNNN
 C A G T A C T G G T A C A G T C A C T G A C T G A C T G A C G T G A T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T