Information for 18-TCWGGTTTCAGCWTCT (Motif 26)

A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G G T C A C G A T A C T G T A G C G A C T A C T G C G T A G T C A C G T A A G T C A T G C C G A T A C T G C G T A
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.746
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 30.7bp
Average Position of motif in Background28.9 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCWGGTTTCAGCWTCT
GKVTCADRTTWC-------
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCWGGTTTCAGCWTCT
GKMTCADRTTWC-------
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCWGGTTTCAGCWTCT
--TGGTTTCAGT----
 A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCWGGTTTCAGCWTCT
---AGTTTCAGTTTC-
 A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCWGGTTTCAGCWTCT
GGTCTGGCAT--------
 A C G T A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCWGGTTTCAGCWTCT
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCWGGTTTCAGCWTCT
---ACTTTCACTTTC-
 A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCWGGTTTCAGCWTCT----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------TCWGGTTTCAGCWTCT
NNTNNTGTCTGGNNTNG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCWGGTTTCAGCWTCT-
---AGTTTCGGTTTCGN
 A C G T A G T C C G T A A T C G C T A G G A C T A C G T A C G T A G T C C G T A A C T G G T A C C G T A A C G T A G T C C G A T A C G T
A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A