Information for 16-GCTCCTGCTGGCCCGG (Motif 24)

A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
Reverse Opposite:
A G T C A G T C A T C G A T C G A C T G G T A C A G T C C G T A A C T G T G A C C T G A C T A G A T C G C T G A A C T G A G T C
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 24.0bp
Average Position of motif in Background42.9 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCTCCTGCTGGCCCGG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTCCTGCTGGCCCGG
CCCCCTGCTGTG----
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GCTCCTGCTGGCCCGG-----
-------CAGGCCNNGGCCNN
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GCTCCTGCTGGCCCGG-
---------GGCGCGCT
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCTCCTGCTGGCCCGG
SNGCACCTGCHS------
 A C G T A C G T A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GCTCCTGCTGGCCCGG----
------ACATGCCCGGGCAT
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCTCCTGCTGGCCCGG
TCNCCTGCTGNGNNN-
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCTCCTGCTGGCCCGG
TNTCCTGCTGTGNNG-
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GCTCCTGCTGGCCCGG
--------AGGCCTAG
 A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCTGCTGGCCCGG
AGATGCTRCTRCCHT--
 A C G T A C T G A G T C G A C T A T G C A G T C A G C T A C T G G T A C C G A T A C T G A C T G A G T C A T G C A T G C A C T G A C T G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T