Information for 13-GCCCCAATTA (Motif 44)

A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C T G A C T G G T A C
p-value:1e-6
log p-value:-1.423e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.5 +/- 18.9bp
Average Position of motif in Background33.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.82
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAA
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:2
Score:0.81
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAG
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

Msx3/MA0709.1/Jaspar

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAA
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GCCCCAATTA--
--CCCAATTAGC
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

LBX2/MA0699.1/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GCCCCAATTA--
--GCCAATTAGC
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C

GBX1/MA0889.1/Jaspar

Match Rank:6
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GCCCCAATTA--
--ACTAATTAGC
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

Prrx2/MA0075.2/Jaspar

Match Rank:7
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAA
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A

Shox2/MA0720.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CTAATTAA
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A G T C G A C T G C T A G T C A G C A T C A G T G C T A T C G A

DLX6/MA0882.1/Jaspar

Match Rank:9
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAC
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GCCCCAATTA-
---CCAATTAC
 A C T G A G T C A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C