Information for 10-CTGACACGTT (Motif 43)

A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C T G A C G T A C T G A C G T G T A C C G T A C T A G
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.5 +/- 21.6bp
Average Position of motif in Background54.2 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt/MA0004.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CTGACACGTT
----CACGTG
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGACACGTT-
TAACGACACGTGC
 A C G T A C G T A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGACACGTT
TTTCACACCTN
 A C G T A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGACACGTT
-TGACACCT-
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGACACGTT
-TCACACCT-
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTGACACGTT--
--NACACGTGCN
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTGACACGTT--
--GACACGTGCC
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTGACACGTT
--GHCACGTG
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTGACACGTT-
---ACACGTGC
 A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGACACGTT
KTTCACACCT-
 A C G T A G T C C G A T A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T