Information for 3-GYTCTTGRGCACAGAY (Motif 4)

A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
Reverse Opposite:
C T A G C G A T A G T C A C G T A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A A T C G C G T A T C A G G T A C
p-value:1e-12
log p-value:-2.842e+01
Information Content per bp:1.757
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 24.3bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GYTCTTGRGCACAGAY
NNNNTTGGGCACNNCN
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GYTCTTGRGCACAGAY--
-TACATGTGCACATAAAA
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GYTCTTGRGCACAGAY--
-CAGATGTGCACATACGT
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:GYTCTTGRGCACAGAY
---------CACAGN-
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GYTCTTGRGCACAGAY--
-NNNNTGAGCACTGTNNG
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GYTCTTGRGCACAGAY-
-------TGCCCAGNHW
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GYTCTTGRGCACAGAY
---NGTGGGCAT----
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GYTCTTGRGCACAGAY
----CCAGGAACAG--
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GYTCTTGRGCACAGAY
GGGCCGTGTGCAAAAA-
 A C G T A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GYTCTTGRGCACAGAY-
-----RGGGCACTAACY
 A C T G A G T C G A C T A T G C C G A T C G A T A C T G T C A G A C T G A G T C G T C A A G T C C G T A A C T G C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T