Information for 13-TGGCCAAGYGCTTTGS (Motif 19)

C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
Reverse Opposite:
A T C G A T G C G T C A T C G A C G T A A C T G T G A C T C G A G A T C A C G T C G A T A C T G A T C G G A T C A G T C G T C A
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.680
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets59.9 +/- 24.1bp
Average Position of motif in Background50.2 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCCAAGYGCTTTGS
CCGCCCAAGGGCAG---
 A C G T C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGCCAAGYGCTTTGS
--ACCACGTGCTC---
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGCCAAGYGCTTTGS
---CCATGTGCTT---
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCCAAGYGCTTTGS
-GACCACGCCCTTATT
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCAAGYGCTTTGS
NTGCCCANNGGTNA---
 A C G T C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGCCAAGYGCTTTGS
-GACCCCCCGCTGTG-
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCAAGYGCTTTGS
TTGGCANNNTGCCAAG-
 A C G T C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGCCAAGYGCTTTGS
AGGCCTAG--------
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCAAGYGCTTTGS
NNCNTGACCCCGCTCT----
 A C G T A C G T A C G T A C G T C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGGCCAAGYGCTTTGS
CGACCAACTGCCGTG-
 C A G T C T A G C T A G A T G C G T A C G C T A T G C A C T A G A G C T A C T G A G T C G A C T A G C T A C G T A T C G A T G C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T