Information for 11-CTCCTHHTTCTATTTG (Motif 16)

A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G
Reverse Opposite:
T A G C C G T A C T G A C G T A A C G T C T G A A T C G C T G A C G T A C T A G C A G T C G T A C T A G A C T G C G T A C T A G
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.718
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.7 +/- 23.6bp
Average Position of motif in Background44.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG---
---------CTATTTTTGG
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG------
-------TTCTATTTTTAGNNN
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG----
--------KCTATTTTTRGH
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTHHTTCTATTTG
ANTCCTTTGTCTNNNN-
 A C G T A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTHHTTCTATTTG--
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CTCCTHHTTCTATTTG----
--------GCTATTTTTGGM
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CTCCTHHTTCTATTTG----
--------GCTATTTTTAGC
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG
----TAATYNRATTAR
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G
A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG----
--------TCTATTTTTAGA
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CTCCTHHTTCTATTTG----
--------TCTATTTATAGN
 A G T C G A C T G T A C A G T C A C G T G C T A G A T C G C A T A G C T A T G C A G C T T G C A A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T