p-value: | 1e-10 |
log p-value: | -2.437e+01 |
Information Content per bp: | 1.720 |
Number of Target Sequences with motif | 24.0 |
Percentage of Target Sequences with motif | 3.69% |
Number of Background Sequences with motif | 322.0 |
Percentage of Background Sequences with motif | 0.65% |
Average Position of motif in Targets | 50.0 +/- 30.6bp |
Average Position of motif in Background | 50.3 +/- 28.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TAAGTAGGGC-- TATAAGTAGGTCAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAAGTAGGGC- -AAYTAGGTCA |
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PH0039.1_Mnx1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TAAGTAGGGC-- GTACTAATTAGTGGCG |
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LBX1/MA0618.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TAAGTAGGGC TTAATTAG--- |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TAAGTAGGGC------ NNNNTTGGGCACNNCN |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TAAGTAGGGC GTTAACTAGN-- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAAGTAGGGC TTAAGTGGT-- |
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PB0143.1_Klf7_2/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TAAGTAGGGC-------- -NNNTNGGGCGTATNNTN |
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PH0029.1_En2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TAAGTAGGGC- NTNCACTAATTAGNGCA |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAAGTAGGGC-- NTNNTTAAGTGGNTNAN |
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