Information for 1-TCCGGSCAGAATGARC (Motif 1)

A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
Reverse Opposite:
A C T G A G C T G A C T A G T C C G T A A C G T A C G T A G T C A C G T A C T G A T C G A T G C A G T C A C T G A C T G C G T A
p-value:1e-14
log p-value:-3.401e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 23.1bp
Average Position of motif in Background71.3 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCCGGSCAGAATGARC--
---GGTCANNGTGACCTN
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C A C G T A C G T
A C G T A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCGGSCAGAATGARC
TNNGGGCAG-------
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCCGGSCAGAATGARC
TTTTCCCGCCAAAA-----
 A C G T A C G T A C G T A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCCGGSCAGAATGARC
ARGAGGMCAAAATGW--
 A C G T A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TCCGGSCAGAATGARC-
--AGGNCANNGTGACCT
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C A C G T
A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCGGSCAGAATGARC-
-------NTAATGAGCT
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCCGGSCAGAATGARC
NRYTTCCGGY----------
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCCGGSCAGAATGARC--
---GRACAGWMTGTYCTB
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCCGGSCAGAATGARC--
-AAGGTCACGGTGACCTG
 A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C A C G T A C G T
A C G T C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCCGGSCAGAATGARC
TTCCNGGAAG-------
 A C G T A C G T A G T C G T A C A C T G A T C G A T G C G T A C C G T A A C T G C G T A C G T A A C G T C T A G C G T A C T G A G T A C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T