Information for 4-GKGAGTMACTGGTACC (Motif 20)

C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
Reverse Opposite:
A T C G A C T G C G A T T G C A A G T C A G T C C T G A A C T G A C G T A C G T C G T A T A G C C A G T T G A C G T A C A G T C
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.714
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.8 +/- 22.4bp
Average Position of motif in Background67.2 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GKGAGTMACTGGTACC--
--CAATCACTGGCAGAAT
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

FOSL1/MA0477.1/Jaspar

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKGAGTMACTGGTACC
NATGAGTCACC------
 A C G T C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC
---GTTAACTAGN---
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC
-TGAGTGACAGSC---
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC
NTGATTGACAGN----
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GKGAGTMACTGGTACC
TTAAGGGGATTAACTAC----
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GKGAGTMACTGGTACC
TGAGGGGGATTAACTAT----
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC
NTGAGTCATCN-----
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC-
GANGTTAACTAGTTTNN
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GKGAGTMACTGGTACC
ATGAGTCATCN-----
 C T A G C A T G A C T G G C T A A C T G C G A T T G C A T G C A A G T C G A C T T A C G A C T G A C G T G C T A G T A C A T G C
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T