Information for 11-GCCTAAGGCACAG (Motif 17)

A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T C T A G G T A C A G T C A C G T A C G T C T G A A C T G A C T G G T A C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 22.7bp
Average Position of motif in Background45.3 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAGGCACAG
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAGGCACAG
AGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCTAAGGCACAG
CGCCTCAGGCA---
 A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGCACAG
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGCACAG
ANTGCCTGAGGCAAN-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGCACAG
WTGSCCTSAGGS----
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGCACAG
NTCGCCTCAGGCAAT-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCTAAGGCACAG
---CCAGGAACAG
 A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCTAAGGCACAG
ATGCCCTGAGGC----
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAAGGCACAG
NTCCCCTCAGGGANT-
 A C G T A C G T A C G T A C T G A G T C A G T C A G C T C G T A C G T A A C T G C A T G A G T C C G T A A G T C C G T A A C T G
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T