Information for 10-CAAGACTGGATGA (Motif 16)

A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A C G A T G T A C A G T C C G T A C T A G A C G T A G T C G C A T A C G T A C T G
p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.7 +/- 26.0bp
Average Position of motif in Background62.3 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGACTGGATGA
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAGACTGGATGA
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGACTGGATGA--
-TTGCCCGGATTAGG
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAAGACTGGATGA-
ACTATGAATGAATGAT
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAAGACTGGATGA-
------NGGATTAN
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGACTGGATGA-----
-TGAACCGGATTAATGAA
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAGACTGGATGA-----
-TGAACCGGATTAATGAA
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAAGACTGGATGA--
-AAGATAAGATAACA
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAAGACTGGATGA
----ACCGGAAG-
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A
A C G T A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CAAGACTGGATGA-
--------CATGAC
 A G T C C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G C G T A C G A T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C