Information for 4-TRTTTGYTTA (Motif 4)

C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
Reverse Opposite:
C G A T G T C A G T C A C T A G A G T C C G T A G T C A C T G A G A C T C G T A
p-value:1e-15
log p-value:-3.499e+01
Information Content per bp:1.676
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1171.8
Percentage of Background Sequences with motif2.54%
Average Position of motif in Targets53.6 +/- 27.0bp
Average Position of motif in Background49.5 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TRTTTGYTTA
TRTTTACTTW
 C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYTTA
TGTTTACTTT
 C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TRTTTGYTTA
TGTTTACTTT
 C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TRTTTGYTTA
TGTTTATTT-
 C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TRTTTGYTTA
TTTGTTTACTTA
 A C G T A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTGYTTA
ATATTTACATA
 A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TRTTTGYTTA----
NNNNTTTGTTTACNNT
 A C G T A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TRTTTGYTTA-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TRTTTGYTTA
GAATGTTTGTTT-
 A C G T A C G T A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TRTTTGYTTA------
NNNTTTGTTTACNTTNN
 A C G T C G A T C T G A A G C T A C G T C G A T T C A G A G T C A C G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T