Information for 2-BTCCTGTCCTGGAGRV (Motif 2)

A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
Reverse Opposite:
A C T G A G T C A G T C G A C T A G T C A T G C C G T A A C T G A T C G C T G A A G T C C G T A C T A G A C T G G T C A T A G C
p-value:1e-17
log p-value:-4.144e+01
Information Content per bp:1.671
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif68.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.5 +/- 20.4bp
Average Position of motif in Background41.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV
----TGACCTYA----
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV
----TGACCT------
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV
--BNTGDCCTTG----
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--BTCCTGTCCTGGAGRV
ACTTCCTGTT--------
 A C G T A C G T A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--BTCCTGTCCTGGAGRV
ATTTCCTGTN--------
 A C G T A C G T A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV-
---NTGCCCANNGGTNA
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:BTCCTGTCCTGGAGRV
---ATGCCCTGAGGC-
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---BTCCTGTCCTGGAGRV
CACTTCCTGT---------
 A C G T A C G T A C G T A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV
----TGACCTTGAN--
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:BTCCTGTCCTGGAGRV
----TGACCTTGAV--
 A T C G A C G T A G T C G A T C C G A T A C T G A G C T A T G C A G T C C G A T A T C G T A C G C T G A A C T G T C A G T G A C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T