Information for 10-GACTGGTTAT (Motif 27)

A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.836e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.4 +/- 36.9bp
Average Position of motif in Background54.1 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACTGGTTAT----
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACTGGTTAT-
TATTGTTTATT
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACTGGTTAT-
-ACTAGTTAAC
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GACTGGTTAT----
--NTGTTTAYATWW
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGTTAT-
TGATTGGCTANN
 A C G T A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACTGGTTAT
---TGTTTAC
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GACTGGTTAT
---TGTTTAC
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C

GRHL1/MA0647.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGTTAT
NAAACCGGTTTT
 A C G T A C G T A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GACTGGTTAT
--CTAATTAA
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GACTGGTTAT--
---TGTTTATTT
 A C T G C G T A A G T C A C G T A C T G C T A G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T