Information for 1-CAGAACGTTC (Motif 2)

T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C
Reverse Opposite:
C A T G T C G A T G C A G A T C C T A G A C G T A G C T T G A C G C A T A T C G
p-value:1e-43
log p-value:-9.907e+01
Information Content per bp:1.579
Number of Target Sequences with motif254.0
Percentage of Target Sequences with motif32.48%
Number of Background Sequences with motif6153.2
Percentage of Background Sequences with motif13.21%
Average Position of motif in Targets50.9 +/- 24.7bp
Average Position of motif in Background50.0 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGAACGTTC--
GVACAGNMTGTYCTB
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGAACGTTC--
GRACAGWMTGTYCTB
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGAACGTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CAGAACGTTC-------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAGAACGTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CAGAACGTTC--
TTCTAGAABNTTCTA
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGAACGTTC
TTCTAGAACGTTC
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGAACGTTC
AACAGGAAGT--
 A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGAACGTTC--
GAACADWATGTTCTT
 A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAGAACGTTC--
AGNACANNNTGTNCTN
 A C G T A C G T A C G T A C G T T A G C C G T A A C T G T C G A T G C A G A T C C T A G A C G T A G C T G T A C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C