Information for 12-CAAAGGGCCTCCC (Motif 18)

G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 22.4bp
Average Position of motif in Background51.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAAAGGGCCTCCC
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGGCCTCCC
AACAAAGG-------
 A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGGCCTCCC
RACAAWGG-------
 A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGGGCCTCCC
NANAGATCAAAGGGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAAGGGCCTCCC-
AGAAATGACTTCCCT
 A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAAGGGCCTCCC
CAAAGGTCAG---
 G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGGCCTCCC
AAAACAAAGG-------
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAAAGGGCCTCCC--
--AGGGGAATCCCCT
 G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C A C G T A C G T
A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAAAGGGCCTCCC
NNNAGATCAAAGGANNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGGCCTCCC
ACATCAAAGG-------
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A C G T A A C T G C T A G A C T G A G T C G T A C A C G T A G T C G T A C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T