Information for 3-KGTTTTTGCWATGCAT (Motif 11)

A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G G T A C G T C A C A G T C G A T C T A G G A T C C G T A C T G A G T C A G T C A C G T A G T A C G T A C
p-value:1e-13
log p-value:-3.114e+01
Information Content per bp:1.739
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 28.6bp
Average Position of motif in Background43.4 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KGTTTTTGCWATGCAT
ANATTTTTGCAANTN--
 A C G T A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT-----
----TNNATTATGCATANNTT
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGTTTTTGCWATGCAT--
---CTTTGTTATGCAAAT
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:KGTTTTTGCWATGCAT----
---AATCGCACTGCATTCCG
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT--
---CATTGTTATGCAAAT
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT-
NSTGTTTRCWCAGBNNN
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT
-NATTGTGCAAT----
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----KGTTTTTGCWATGCAT
NNNNTTTTTTTTTNAAC---
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT
NNTTTTTCTTATNT--
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:KGTTTTTGCWATGCAT
--CTGTTGCTAGGS--
 A C T G A C T G C G A T A C G T A C G T A G C T A C G T C A T G A G T C C G T A G T C A A C G T A C T G G T A C C G T A A G C T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T