Information for 22-AAGGCAGAGATCA (Motif 33)

C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C G T A T C G A G T C A G T C C A G T A C G T
p-value:1e-3
log p-value:-8.955e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 14.0bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGGCAGAGATCA
TAGGGCAAAGGTCA
 A C G T C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGGCAGAGATCA
GTAGGGCAAAGGTCA
 A C G T A C G T C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGGCAGAGATCA
GAGGTCAAAGGTCA
 A C G T C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGGCAGAGATCA-----
-AAGGCGAAATCATCGCA
 C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCAGAGATCA
TGGGGCAAAGGTCA
 A C G T C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAGGCAGAGATCA-
----CAAAGGTCAG
 C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGGCAGAGATCA----
GACAGAGATATCAGTGT
 C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGCAGAGATCA
AGGGGTCAGAGGTCA
 A C G T A C G T C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAGGCAGAGATCA
-----AGRGGTCA
 C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAGGCAGAGATCA----
----CAAAGGTCAAGGG
 C G T A G T C A C T A G A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G