Information for 19-CCTGGGGATTGAC (Motif 31)

A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A C G T A A C G T A G T C A G T C A G T C A G T C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 26.8bp
Average Position of motif in Background41.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0123.1_Obox3/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGATTGAC---
TGAGGGGGATTAACTAT
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGATTGAC--
CGTTGGGGATTAGCCT
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTGGGGATTGAC
--TGGGGA-----
 A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCTGGGGATTGAC
ANTCCCTNGGGAAT---
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGATTGAC---
TGAGGGGGATTAACTAT
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTGGGGATTGAC
--TGTGGATTNNN
 A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGATTGAC---
TTAAGGGGATTAACTAC
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTGGGGATTGAC---
TTAGAGGGATTAACAAT
 A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGATTGAC
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCTGGGGATTGAC----
-AGGGGGATTAGCTGCC
 A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C