Information for 8-ACTGACCTAA (Motif 13)

C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
Reverse Opposite:
G C A T C A G T C G T A C T A G T A C G G A C T T G A C C G T A A T C G G C A T
p-value:1e-12
log p-value:-2.856e+01
Information Content per bp:1.670
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif647.3
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets53.8 +/- 30.2bp
Average Position of motif in Background50.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ACTGACCTAA
--TGACCTYA
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ACTGACCTAA
--TGACCT--
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ACTGACCTAA--
--TGACCTARTT
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACTGACCTAA-----
-TTGACCTANTTATN
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACCTAA
NNACTTACCTN-
 A C G T A C G T C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACTGACCTAA--
--TGACCTTGAT
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACTGACCTAA
--TGACCYCT
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACTGACCTAA
-GTGACCTT-
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACTGACCTAA
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTGACCTAA
GATGACGTCA
 C G T A T A G C C G A T A C T G C T G A A T G C G A T C G C A T G T C A C G T A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A