Information for 7-GCTTGGGGCA (Motif 12)

A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T C T A G T G A C A G T C G A T C G T A C C G T A G C T A A T C G A T G C
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.697
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif7.57%
Number of Background Sequences with motif1210.1
Percentage of Background Sequences with motif2.51%
Average Position of motif in Targets57.4 +/- 27.0bp
Average Position of motif in Background49.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGGCA
NGCCTGAGGCN
 A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGGCA
NGCCTNAGGCN
 A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGGCA
TGCCTGAGGCN
 A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCTTGGGGCA--
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCTTGGGGCA--
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTTGGGGCA-
--TNNGGGCAG
 A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTTGGGGCA-
--NGTGGGCAT
 A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGGGGCA
TGCCCNGGGGCA
 A C G T A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGGGGCA
TGCCCTNGGGCA
 A C G T A C G T A T C G A T G C C G A T G C A T C A T G C T A G A C T G A C T G A G T C C T G A
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A