Information for 12-ACATTGGCAA (Motif 15)

C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
Reverse Opposite:
G C A T C A G T A T C G A T G C G T A C C G T A C T G A A C G T T C A G A G C T
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.829
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif104.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.0 +/- 29.1bp
Average Position of motif in Background47.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:ACATTGGCAA
---TTGGCA-
 C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ACATTGGCAA-
-NNTTGGCANN
 C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ACATTGGCAA-
--NTTGGCANN
 C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACATTGGCAA
--CTTGGCAA
 C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACATTGGCAA
CCGATTGGCT-
 A C G T C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACATTGGCAA--
TGATTGGCTANN
 C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACATTGGCAA---
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACATTGGCAA
VRAACAATGG---
 A C G T A C G T A C G T C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ACATTGGCAA--
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATTGGCAA
CTCATTGTC--
 A C G T C T G A A G T C G T C A G A C T A C G T A C T G A T C G A T G C G C T A C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T