Information for 17-TGGAGCGGAC (Motif 40)

A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C T G A G T C A C G T A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.216e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.0 +/- 9.4bp
Average Position of motif in Background36.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGAGCGGAC----
--NCGCGGACGTTG
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGAGCGGAC
CGGAGC----
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGAGCGGAC
TGGAACAGMA
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGCGGAC--
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGAGCGGAC---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGGAGCGGAC
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGAGCGGAC
BTBRAGTGSN-
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGCGGAC
GTGGAT-----
 A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAGCGGAC
TTGAGTGSTT
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGAGCGGAC
--CAGCC---
 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T