Information for 20-GGCCACATACAGACAA (Motif 31)

A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G C T A G T C C G A T A T C G A G C T C G T A A C G T A C T G C G A T A C T G A C T G A G T C G T A C
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 33.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCCACATACAGACAA-
GACCACATTCATACAAT
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GGCCACATACAGACAA
--------BCAGACWA
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCCACATACAGACAA----
---CAAATCCAGACATCACA
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCCACATACAGACAA---
----ATTTGCATACAATGG
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGCCACATACAGACAA--
--------CCAGACRSVB
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCCACATACAGACAA
-GCCACACCCA-----
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GGCCACATACAGACAA
--------CCAGACAG
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

SRF/MA0083.3/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCCACATACAGACAA
TGACCATATATGGTCA-
 A C G T A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCCACATACAGACAA
GGCCACACCCAN----
 A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCCACATACAGACAA
RGGGCACTAACY-----
 A C G T A C T G A C T G A G T C A G T C C G T A A G T C G T C A A C G T C T G A A T G C C G T A A C T G C T G A A G T C C G T A C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T