p-value: | 1e-9 |
log p-value: | -2.077e+01 |
Information Content per bp: | 1.736 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 6.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.7 +/- 29.6bp |
Average Position of motif in Background | 32.6 +/- 20.4bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGCASAGKGGCAGGC TTGGCANNNTGCCAAG- |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCASAGKGGCAGGC-- YCAGGCWCAGTACCAGGCTC |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCASAGKGGCAGGC TGGCAGNCTGCCAG-- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCASAGKGGCAGGC TGGCACCATGCCAA-- |
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TFAP2B(var.3)/MA0813.1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCASAGKGGCAGGC TGCCCTNAGGGCA--- |
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TFAP2A(var.3)/MA0872.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGGCASAGKGGCAGGC TGCCCNNAGGGCA--- |
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TFAP2C(var.3)/MA0815.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCASAGKGGCAGGC TGCCCTGAGGGCA--- |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGGCASAGKGGCAGGC---- ---NAGANTGGCGGGGNGNA |
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Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGGCASAGKGGCAGGC GTAGGTCACTGGGTCA--- |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TGGCASAGKGGCAGGC ----TGAGTGACAGSC |
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