Information for 3-CATKKCTGCCYGW (Motif 2)

A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
Reverse Opposite:
C G T A A G T C C T G A A C T G A C T G G T A C C G T A A T C G G T A C G T C A G T C A A C G T A C T G
p-value:1e-16
log p-value:-3.755e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 32.0bp
Average Position of motif in Background50.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATKKCTGCCYGW
GTCATGCHTGRCTGS
 A C G T A C G T A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CATKKCTGCCYGW-
-----CTGCCCGCA
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATKKCTGCCYGW
RCATTCCWGG----
 A C G T A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CATKKCTGCCYGW
---CACTTCCTGT
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CATKKCTGCCYGW-
----ACTTCCTGTT
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CATKKCTGCCYGW
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CATKKCTGCCYGW
-----CTTCCGGT
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CATKKCTGCCYGW-
----ACTTCCGGTT
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

HOXA5/MA0158.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CATKKCTGCCYGW
AATTAGTG-----
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CATKKCTGCCYGW
--TTCCCGCCWG-
 A G T C G T C A A C G T A C G T A C T G A T G C A C G T A C T G A G T C A G T C A G C T A C T G C G A T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T