Information for 3-ATTGCCATCT (Motif 4)

C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T
Reverse Opposite:
C G T A A T C G C T G A C A G T C T A G A C T G T A G C G T C A C T G A G C A T
p-value:1e-21
log p-value:-4.849e+01
Information Content per bp:1.536
Number of Target Sequences with motif285.0
Percentage of Target Sequences with motif36.73%
Number of Background Sequences with motif10320.5
Percentage of Background Sequences with motif21.66%
Average Position of motif in Targets50.7 +/- 25.3bp
Average Position of motif in Background50.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ATTGCCATCT---
---GCCATCTGTT
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATTGCCATCT---
---ACCATCTGTT
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATTGCCATCT
--TGTCANYT
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATTGCCATCT-
NNAGATNVNWATCTN
 A C G T A C G T A C G T A C G T C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATTGCCATCT
-ATGCCAACC
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTGCCATCT----
GTATTGACAGCTNNTT
 A C G T A C G T C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTGCCATCT------
CCNNACCATCTGGCCTN
 A C G T C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGCCATCT--
GCNGCCATCTTG
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATTGCCATCT
-TTGCCAAG-
 C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTGCCATCT----
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C G T A G A C T C A G T A T C G T G A C G A T C G T C A G A C T T A G C G C A T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T